Basic Information
Locus ID:
Pt_Chr0304831
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 158503256 | 158515112 | - | Pt_Chr0304831 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 218,066.13 Da | 56.31 | 87.88 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 263 | 437 | 2.3E-63 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 473 | 1.35E-106 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 135 | 263 | 4.3E-35 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 264 | 476 | 3.6E-79 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 139 | 445 | 8.3E-134 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 141 | 437 | 91.435173 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 336 | 347 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 213 | 234 | 1.3E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 387 | 408 | 1.3E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 304 | 321 | 1.3E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 337 | 355 | 1.3E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1916 | 1942 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 102 | - | - |
| Coils | Coil | Coil | 688 | 708 | - | - |
| Coils | Coil | Coil | 868 | 888 | - | - |
| Coils | Coil | Coil | 1364 | 1391 | - | - |
| Coils | Coil | Coil | 1095 | 1150 | - | - |
| Coils | Coil | Coil | 1477 | 1522 | - | - |
| Coils | Coil | Coil | 525 | 552 | - | - |
| Coils | Coil | Coil | 1540 | 1574 | - | - |
| Coils | Coil | Coil | 1724 | 1751 | - | - |
| Coils | Coil | Coil | 444 | 471 | - | - |
| Coils | Coil | Coil | 1834 | 1889 | - | - |
| Coils | Coil | Coil | 1627 | 1654 | - | - |
| Coils | Coil | Coil | 822 | 842 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.2 | - | 0 |
| RefSeq | XP_047066124.1 | kinesin-like protein KIN-12E [Lolium rigidum] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 0 | |
| TrEMBL | A0A8I7B2C7 | Kinesin motor domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology