Basic Information
Locus ID:
Pt_Chr0304246
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 138663283 | 138668981 | - | Pt_Chr0304246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 65,096.84 Da | 43.57 | 85.91 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 32 | 126 | 8.0E-16 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 246 | 1.9E-9 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 349 | 431 | 1.5E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 327 | 544 | 2.25E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 557 | 4.6E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 308 | 421 | 6.5E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 129 | 1.1E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 250 | 2.3E-20 | IPR038408 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 602 | 13.403993 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 250 | 17.285437 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 25 | 129 | 18.000551 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 375 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_051215529.1 | cysteine-rich receptor-like protein kinase 10 isoform X1 [Lolium perenne] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C4D9 | Cysteine-rich receptor-like protein kinase 10 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology