Basic Information
Locus ID:
Pt_Chr0304217
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 137650439 | 137657468 | - | Pt_Chr0304217 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 114,757.97 Da | 41.72 | 87.11 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 570 | 663 | 1.3E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 144 | 393 | 1.2E-40 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 443 | 521 | 3.3E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 22 | 152 | 5.7E-14 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 707 | 986 | 2.1E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 418 | 7.28E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 1014 | 7.82E-63 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 762 | 6.8E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 799 | 995 | 1.6E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 197 | 406 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 68 | 150 | 6.1E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 560 | 665 | 1.3E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 196 | 5.1E-5 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 439 | 544 | 4.5E-8 | IPR038408 |
| SMART | SM00220 | serkin_6 | 689 | 1004 | 5.1E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 126 | 393 | 1.7E-13 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 559 | 666 | 13.918054 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 438 | 541 | 10.994226 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 400 | 30.95842 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 995 | 29.488483 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 46 | 155 | 14.796107 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.2 | - | 0 |
| RefSeq | XP_051215545.1 | cysteine-rich receptor-like protein kinase 19 isoform X1 [Lolium perenne] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0D3GRY6 | Protein kinase domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH03.3240, BH03.3426, BH03.3427, CH03.3631, CH03.3633 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_7AG0570290, gene-QOZ80_7AG0570300 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139060.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_040836 |
| Poaceae | Oryza coarctata | 2 | Oco13G009190, Oco13G009200 |
| Poaceae | Oryza sativa | 2 | LOC_Os07g12850.1, LOC_Os07g34980.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G300600, gene-BS78_02G300700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304217 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr19G005280, Chr24G009130, Chr28G008530 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G405900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028910, gene_TRIDC2BG032640 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217500.1, TraesCS2B02G243000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb106340_P001, Zm00001eb323200_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-820 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g6569, Zma_g6571 |