Basic Information
Locus ID:
Pt_Chr0303908
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 116150754 | 116157790 | + | Pt_Chr0303908 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 49,383.47 Da | 49.59 | 80.39 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 326 | 453 | 3.17402E-23 | IPR002083 |
| CDD | cd00121 | MATH | 42 | 169 | 2.45747E-17 | IPR002083 |
| Pfam | PF00917 | MATH domain | 56 | 168 | 3.6E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 199 | 263 | 1.7E-12 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 325 | 455 | 3.11E-29 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 40 | 175 | 8.5E-17 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 187 | 287 | 2.24E-21 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 263 | 326 | 7.6E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 178 | 262 | 6.5E-22 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 36 | 173 | 2.1E-17 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 327 | 456 | 1.8E-26 | IPR008974 |
| SMART | SM00225 | BTB_4 | 206 | 291 | 3.3E-6 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 325 | 452 | 15.992988 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 206 | 262 | 13.198161 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 36 | 169 | 12.617814 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_051229725.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium perenne] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6RGP8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_065872, gene-QYE76_066017 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0303908 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG065000 |