Basic Information
Locus ID:
Pt_Chr0303792
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Glycosyl transferase family 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 111657647 | 111664563 | - | Pt_Chr0303792 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 104,423.58 Da | 47.74 | 83.92 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00393 | 6-phosphogluconate dehydrogenase, C-terminal domain | 810 | 851 | 3.6E-13 | IPR006114 |
| Pfam | PF01697 | Glycosyltransferase family 92 | 303 | 515 | 9.7E-29 | IPR008166 |
| Pfam | PF03446 | NAD binding domain of 6-phosphogluconate dehydrogenase | 729 | 792 | 9.9E-8 | IPR006115 |
| Pfam | PF00393 | 6-phosphogluconate dehydrogenase, C-terminal domain | 852 | 939 | 5.5E-18 | IPR006114 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 729 | 796 | 2.36E-7 | IPR036291 |
| SUPERFAMILY | SSF48179 | 6-phosphogluconate dehydrogenase C-terminal domain-like | 810 | 939 | 2.38E-30 | IPR008927 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 302 | 458 | 6.37E-7 | IPR029044 |
| Gene3D | G3DSA:1.10.1040.10 | - | 812 | 851 | 6.7E-13 | IPR013328 |
| Gene3D | G3DSA:3.40.50.720 | - | 722 | 810 | 1.0E-5 | - |
| Gene3D | G3DSA:1.10.1040.10 | - | 852 | 942 | 8.3E-19 | IPR013328 |
| SMART | SM01350 | 6PGD_2 | 810 | 944 | 5.7E-12 | IPR006114 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37420.1 | Domain of unknown function (DUF23). | 0 |
| RefSeq | XP_051224944.1 | glycosyltransferase family 92 protein Os08g0121900-like [Lolium perenne] | 0 |
| Q6YRM6 | Glycosyltransferase family 92 protein Os08g0121900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0121900 PE=2 SV=1 | 0 | |
| TrEMBL | F2DH02 | Glycosyltransferase family 92 protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology