Basic Information
Locus ID:
Pt_Chr0303612
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 104790772 | 104791339 | - | Pt_Chr0303612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 15,863.98 Da | 26.02 | 84.61 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 19 | 116 | 5.99193E-39 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 110 | 4.4E-21 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 16 | 118 | 2.15E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 18 | 129 | 2.6E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 18 | 118 | 38.095989 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22480.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_051189906.1 | mavicyanin-like [Lolium perenne] | 0 |
| P29602 | Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3 | 0 | |
| TrEMBL | A0A0Q3JSW5 | Phytocyanin domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g56552v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology