Basic Information
Locus ID:
Pt_Chr0303338
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 93299679 | 93303170 | + | Pt_Chr0303338 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 80,187.96 Da | 47.11 | 100.54 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 445 | 641 | 6.8E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 154 | 213 | 6.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 77 | 9.2E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 709 | 2.43E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 325 | 6.72E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 405 | 517 | 1.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 245 | 337 | 1.7E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 726 | 1.1E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 153 | 5.5E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 244 | 4.4E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 130 | 153 | 9.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 30.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 442 | 694 | 1.8E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 154 | 176 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 442 | 718 | 38.053688 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 562 | 574 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 448 | 476 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 200 | 213 | 1.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 155 | 168 | 1.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_047070008.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Lolium rigidum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453BQ90 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology