Basic Information
Locus ID:
Pt_Chr0303001
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 79996560 | 79999817 | - | Pt_Chr0303001 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 72,651.36 Da | 41.78 | 66.77 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 68 | 121 | 1.59783E-21 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 396 | 602 | 8.5E-73 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 68 | 129 | 7.6E-21 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 65 | 128 | 1.44E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 66 | 176 | 1.8E-24 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 124 | 8.3E-22 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 132 | 18.805468 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 109 | 128 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 1.2E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 1.2E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 1.2E-13 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 170 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_047062860.1 | uncharacterized protein LOC124670395 [Lolium rigidum] | 0 |
| Q8TQR1 | Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | M7YB26 | Chaperone protein DnaJ OS=Triticum urartu OX=4572 GN=TRIUR3_13856 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology