Basic Information
Locus ID:
Pt_Chr0302559
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 65566653 | 65572650 | + | Pt_Chr0302559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.09 | 31,286.92 Da | 43.71 | 90.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 151 | 260 | 9.8E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 257 | 7.55E-38 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 273 | 2.1E-36 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 11 | 115 | 3.5E-20 | IPR036537 |
| SMART | SM00220 | serkin_6 | 111 | 278 | 9.7E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 278 | 22.138803 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.3 | - | 0 |
| RefSeq | XP_037464350.1 | cysteine-rich receptor-like protein kinase 10 [Triticum dicoccoides] | 0 |
| P0DH86 | G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana OX=3702 GN=SRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6SPT5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044364 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0302559 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G711600, Tel7E01G711700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7BG052080, gene_TRIDC7BG052130 |
| Poaceae | Triticum aestivum | 2 | TraesCS7B02G325900.1, TraesCS7B02G326100.1 |