Basic Information
Locus ID:
Pt_Chr0302355
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 59549950 | 59552702 | + | Pt_Chr0302355 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 38,097.35 Da | 42.32 | 80.35 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 53 | 187 | 1.7E-15 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 37 | 207 | 1.31E-28 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 61 | 211 | 8.0E-21 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 52 | 207 | 25.123869 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_051217838.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Lolium perenne] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZGJ2 | NAC domain-containing protein 8 OS=Triticum urartu OX=4572 GN=TRIUR3_04855 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology