Basic Information
Locus ID:
Pt_Chr0302354
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 59538076 | 59541091 | + | Pt_Chr0302354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 37,905.16 Da | 61.04 | 71.40 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 57 | 195 | 7.0E-16 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 215 | 4.05E-32 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 65 | 218 | 1.3E-24 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 56 | 215 | 26.546232 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 285 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_051217839.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Lolium perenne] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C8N4 | NAC domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology