Basic Information
Locus ID:
Pt_Chr0301275
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 29610865 | 29616363 | - | Pt_Chr0301275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 80,076.34 Da | 43.53 | 86.35 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 475 | 723 | 2.37867E-123 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 153 | 279 | 2.6E-29 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 281 | 330 | 2.8E-12 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 469 | 723 | 3.0E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 722 | 1.04E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 546 | 8.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 548 | 730 | 2.4E-58 | - |
| SMART | SM00220 | serkin_6 | 469 | 727 | 1.7E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 469 | 727 | 43.72142 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 475 | 496 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 590 | 602 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 694 | 716 | 8.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 543 | 556 | 8.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 631 | 641 | 8.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 650 | 672 | 8.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 584 | 602 | 8.3E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 88 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_047067625.1 | serine/threonine-protein kinase CTR1-like [Lolium rigidum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453CS07 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology