Basic Information
Locus ID:
Pt_Chr0301213
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 28423901 | 28439566 | - | Pt_Chr0301213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.79 | 113,334.39 Da | 34.06 | 90.40 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 707 | 971 | 6.01152E-97 | - |
| Pfam | PF11721 | Malectin domain | 433 | 619 | 1.2E-40 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 702 | 966 | 1.1E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 392 | 2.21E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 969 | 4.65E-80 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 430 | 5.9E-19 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 431 | 622 | 3.6E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 986 | 8.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 277 | 2.6E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 776 | 2.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 64 | 214 | 2.1E-34 | IPR032675 |
| SMART | SM00220 | serkin_6 | 701 | 969 | 2.3E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 981 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 729 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1043 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1035 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_044333931.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Triticum aestivum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453CQE4 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology