Basic Information
Locus ID:
Pt_Chr0301190
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 27546672 | 27555647 | + | Pt_Chr0301190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 69,192.19 Da | 38.75 | 84.09 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 275 | 405 | 3.2794E-25 | IPR002083 |
| CDD | cd00121 | MATH | 40 | 162 | 5.00502E-19 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 426 | 543 | 7.04589E-50 | - |
| Pfam | PF00651 | BTB/POZ domain | 431 | 545 | 2.0E-29 | IPR000210 |
| Pfam | PF00917 | MATH domain | 301 | 407 | 2.1E-7 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 421 | 544 | 2.28E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 37 | 159 | 1.8E-19 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 272 | 410 | 6.87E-29 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 419 | 547 | 5.7E-37 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 548 | 618 | 7.2E-15 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 38 | 163 | 2.9E-15 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 274 | 410 | 4.9E-27 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 219 | 267 | 6.3E-6 | - |
| SMART | SM00225 | BTB_4 | 440 | 546 | 1.3E-27 | IPR000210 |
| SMART | SM00061 | math_3 | 286 | 390 | 3.3E-4 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 274 | 407 | 19.572718 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 440 | 507 | 17.582745 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 39 | 162 | 11.313769 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_047063678.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | M8BQ29 | Speckle-type POZ protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_047778, gene-QYE76_047782, gene-QYE76_047783 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0301190 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G104900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG027710 |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G418000.1.cds1, TraesCS2A02G418100.1.cds1 ... |