Basic Information
Locus ID:
Pt_Chr0301063
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 24288364 | 24299686 | - | Pt_Chr0301063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 75,827.23 Da | 35.55 | 86.13 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 367 | 490 | 7.3718E-17 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 181 | 291 | 7.87202E-47 | - |
| CDD | cd00121 | MATH | 32 | 153 | 3.15746E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 517 | 592 | 1.2E-18 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 183 | 292 | 1.4E-26 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 165 | 6.54E-31 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 505 | 645 | 6.87E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 363 | 498 | 9.81E-25 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 170 | 291 | 4.32E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 367 | 496 | 9.7E-21 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 617 | 682 | 1.7E-15 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 294 | 366 | 4.5E-19 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 167 | 289 | 1.9E-38 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 497 | 602 | 1.2E-24 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 160 | 3.7E-25 | IPR008974 |
| SMART | SM00225 | BTB_4 | 526 | 649 | 9.3E-14 | IPR000210 |
| SMART | SM00225 | BTB_4 | 192 | 294 | 1.5E-23 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 259 | 16.962286 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 365 | 492 | 14.867929 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 29 | 155 | 19.240314 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 526 | 593 | 17.107059 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_047068197.1 | BTB/POZ and MATH domain-containing protein 2-like [Lolium rigidum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0E0KVI1 | BTB domain-containing protein OS=Oryza punctata OX=4537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology