Basic Information
Locus ID:
Pt_Chr0300666
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
DWNN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 14598281 | 14605924 | + | Pt_Chr0300666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 25,972.90 Da | 50.35 | 57.68 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08783 | DWNN domain | 3 | 81 | 8.0E-19 | IPR014891 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 85 | 1.2E-18 | - |
| SMART | SM01180 | DWNN_2 | 3 | 82 | 7.1E-31 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 3 | 82 | 16.645096 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 58 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051180787.1 | E3 ubiquitin ligase PQT3-like [Lolium perenne] | 0 |
| P97868 | E3 ubiquitin-protein ligase RBBP6 OS=Mus musculus OX=10090 GN=Rbbp6 PE=1 SV=5 | 0 | |
| TrEMBL | F2E1Q0 | Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology