Basic Information
Locus ID:
Pt_Chr0300435
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 8902739 | 8904169 | + | Pt_Chr0300435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 54,761.64 Da | 60.77 | 96.85 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 176 | 383 | 3.1E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 79 | 5.76E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 397 | 1.1E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 46 | 8.2E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051212026.1 | F-box/LRR-repeat protein At4g14103-like [Lolium perenne] | 0 |
| Q9LXR0 | Putative F-box/LRR-repeat protein At3g58920 OS=Arabidopsis thaliana OX=3702 GN=At3g58920 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6DJS5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology