Basic Information
Locus ID:
Pt_Chr0300412
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr03 | 8572218 | 8581933 | + | Pt_Chr0300412 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 100,068.86 Da | 57.86 | 95.26 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 57 | 1.44E-7 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 185 | 778 | 3.2E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 166 | 414 | 1.9E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 589 | 824 | 8.6E-10 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 54 | 2.8E-5 | - |
| Coils | Coil | Coil | 470 | 490 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14103.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_051197316.1 | F-box/LRR-repeat protein At4g14103-like [Lolium perenne] | 0 |
| Q8L7H1 | F-box/LRR-repeat protein At4g14103 OS=Arabidopsis thaliana OX=3702 GN=At4g14103 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0Q3EBL5 | FBD domain-containing protein OS=Brachypodium distachyon OX=15368 GN=104581456 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology