Basic Information
Locus ID:
Pt_Chr0207648
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Short Name:
CAX6
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 252524007 | 252526404 | + | Pt_Chr0207648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 49,628.34 Da | 34.79 | 112.62 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 284 | 424 | 6.3E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 95 | 250 | 1.8E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 265 | 427 | 1.9E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 124 | 264 | 9.0E-16 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 92 | 426 | 9.6E-98 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 59 | 425 | 7.9E-115 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_047076308.1 | putative vacuolar cation/proton exchanger 4 [Lolium rigidum] | 0 |
| Q6YXZ1 | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0138900 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453N956 | Vacuolar cation/proton exchanger OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology