Basic Information
Locus ID:
Pt_Chr0207396
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 241802889 | 241808395 | + | Pt_Chr0207396 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 69,864.34 Da | 35.23 | 98.54 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 315 | 584 | 1.1E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 190 | 5.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 4.1E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 291 | 588 | 9.97E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 209 | 5.35E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 391 | 606 | 4.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 390 | 1.5E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 221 | 8.3E-51 | IPR032675 |
| SMART | SM00220 | serkin_6 | 314 | 587 | 3.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 314 | 597 | 34.901806 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 320 | 342 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 437 | 449 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_051222956.1 | protein NSP-INTERACTING KINASE 3 isoform X1 [Lolium perenne] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453E2G6 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology