Basic Information
Locus ID:
Pt_Chr0207353
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 240562080 | 240567251 | - | Pt_Chr0207353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 42,856.23 Da | 40.12 | 92.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 119 | 234 | 1.3E-36 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 265 | 328 | 8.3E-10 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 118 | 315 | 1.1E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 113 | 252 | 1.9E-37 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 253 | 389 | 1.4E-22 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 258 | 333 | 17.044207 | IPR020587 |
| PRINTS | PR00142 | RecA protein signature | 197 | 226 | 2.4E-45 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 159 | 188 | 2.4E-45 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 270 | 298 | 2.4E-45 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 126 | 155 | 2.4E-45 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 304 | 333 | 2.4E-45 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 357 | 374 | 2.4E-45 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_051228170.1 | DNA repair protein recA homolog 2, mitochondrial isoform X2 [Lolium perenne] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6XDG5 | DNA repair protein recA homolog 2, mitochondrial OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology