HalophFGD

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Basic Information
Locus ID: Pt_Chr0207281
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 238579997 238580695 - Pt_Chr0207281
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.48 9,321.84 Da 91.94 112.89 0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 14 68 3.66E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044352733.1 uncharacterized protein LOC123073757 [Triticum aestivum] 0
TrEMBL A0A453DSW6 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.3HG0222450.1.CDS1 ...
HORVU.MOREX.r3.3HG0222500.1.CDS1
Poaceae Lolium multiflorum 1 gene-QYE76_066273
Poaceae Puccinellia tenuiflora 3 Pt_Chr0206543, Pt_Chr0207280, Pt_Chr0207281
Poaceae Triticum aestivum 3 TraesCS3D02G034400.1.cds1, TraesCS3D02G034600.1.cds1 ...
TraesCS3D02G035000.1.cds1
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