Basic Information
Locus ID:
Pt_Chr0207240
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase SD2-5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 237642560 | 237658882 | - | Pt_Chr0207240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 151,662.55 Da | 45.04 | 75.44 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 665 | 930 | 1.12676E-81 | - |
| CDD | cd09217 | TLP-P | 392 | 574 | 6.08906E-55 | - |
| Pfam | PF00069 | Protein kinase domain | 663 | 926 | 8.2E-47 | IPR000719 |
| Pfam | PF00314 | Thaumatin family | 411 | 574 | 6.7E-30 | IPR001938 |
| Pfam | PF00314 | Thaumatin family | 33 | 224 | 2.5E-39 | IPR001938 |
| Pfam | PF00069 | Protein kinase domain | 1117 | 1268 | 5.3E-29 | IPR000719 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 224 | 2.35E-57 | IPR037176 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 967 | 1008 | 8.5E-9 | IPR037176 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1098 | 1269 | 1.08E-48 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 929 | 1.35E-70 | IPR011009 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 390 | 574 | 7.98E-49 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 732 | 950 | 3.1E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1188 | 1274 | 1.9E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1076 | 1187 | 2.5E-29 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 27 | 224 | 1.3E-56 | IPR037176 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 645 | 731 | 1.4E-22 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 389 | 575 | 4.3E-47 | IPR037176 |
| SMART | SM00205 | tha2 | 392 | 574 | 4.9E-46 | IPR001938 |
| SMART | SM00220 | serkin_6 | 1114 | 1327 | 5.2E-10 | IPR000719 |
| SMART | SM00205 | tha2 | 29 | 224 | 3.0E-64 | IPR001938 |
| SMART | SM00220 | serkin_6 | 659 | 928 | 2.0E-33 | IPR000719 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 973 | 1007 | 8.867264 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 224 | 30.742004 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 414 | 574 | 27.957241 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 626 | 943 | 36.68269 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1114 | 1383 | 25.601633 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1120 | 1141 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 779 | 791 | - | IPR008271 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 391 | 403 | 7.2E-32 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 441 | 470 | 7.2E-32 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 476 | 492 | 7.2E-32 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 428 | 439 | 7.2E-32 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 564 | 573 | 7.2E-32 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1020 | 1046 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1020 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1356 | 1383 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_047058421.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Lolium rigidum] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A077RRJ3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF118700100CFD_c1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology