Basic Information
Locus ID:
Pt_Chr0207104
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
CUE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 234432871 | 234438358 | + | Pt_Chr0207104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 57,547.67 Da | 49.92 | 75.74 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 327 | 359 | 3.9633E-4 | - |
| CDD | cd14279 | CUE | 45 | 81 | 1.50577E-9 | - |
| Pfam | PF02845 | CUE domain | 45 | 84 | 2.4E-6 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 40 | 87 | 9.35E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 38 | 89 | 9.3E-6 | - |
| SMART | SM00546 | cue_7 | 43 | 85 | 2.3E-4 | IPR003892 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 43 | 86 | 13.808876 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| Coils | Coil | Coil | 222 | 249 | - | - |
| Coils | Coil | Coil | 478 | 498 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_051202819.1 | uncharacterized protein LOC127316462 [Lolium perenne] | 0 |
| TrEMBL | M8C049 | CUE domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology