Basic Information
Locus ID:
Pt_Chr0206929
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 229742798 | 229749577 | - | Pt_Chr0206929 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 54,819.72 Da | 48.49 | 68.82 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 214 | 460 | 4.375E-129 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 208 | 460 | 1.2E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 172 | 460 | 2.37E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 286 | 489 | 4.0E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 201 | 285 | 3.6E-31 | - |
| SMART | SM00220 | serkin_6 | 208 | 467 | 4.3E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 208 | 469 | 44.767338 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 327 | 339 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 321 | 339 | 8.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 368 | 378 | 8.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 282 | 295 | 8.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 431 | 453 | 8.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 387 | 409 | 8.9E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_051180383.1 | uncharacterized protein LOC127294576 [Lolium perenne] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453HU27 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology