Basic Information
Locus ID:
Pt_Chr0206882
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 227222485 | 227228076 | + | Pt_Chr0206882 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 80,738.60 Da | 44.62 | 90.89 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 399 | 693 | 8.54197E-122 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 368 | 679 | 1.2E-90 | IPR002495 |
| Pfam | PF00177 | Ribosomal protein S7p/S5e | 19 | 97 | 2.4E-18 | IPR023798 |
| SUPERFAMILY | SSF47973 | Ribosomal protein S7 | 12 | 97 | 7.72E-23 | IPR036823 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 399 | 705 | 1.46E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 401 | 698 | 4.9E-43 | IPR029044 |
| Gene3D | G3DSA:1.10.455.10 | Ribosomal protein S7 domain | 7 | 110 | 3.1E-22 | IPR036823 |
| Coils | Coil | Coil | 278 | 298 | - | - |
| Coils | Coil | Coil | 330 | 350 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_047079893.1 | probable galacturonosyltransferase 4 [Lolium rigidum] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | I1I2S9 | Hexosyltransferase OS=Brachypodium distachyon OX=15368 GN=100830843 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology