Basic Information
Locus ID:
Pt_Chr0206814
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 225305038 | 225307238 | - | Pt_Chr0206814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 48,281.03 Da | 54.41 | 90.43 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 38 | 74 | 1.4E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 36 | 123 | 2.49E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 119 | 1.2E-6 | - |
| SMART | SM00256 | fbox_2 | 37 | 77 | 2.5E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 145 | 360 | 1.7E-19 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10340.1 | F-box family protein. | 0 |
| RefSeq | XP_037461116.1 | putative F-box protein At4g09190 [Triticum dicoccoides] | 0 |
| Q9LX89 | F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ILX6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology