Basic Information
Locus ID:
Pt_Chr0206434
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Glycosyltransferase family 92
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 214761681 | 214766653 | + | Pt_Chr0206434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 102,587.17 Da | 47.04 | 80.85 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03446 | NAD binding domain of 6-phosphogluconate dehydrogenase | 678 | 744 | 7.2E-6 | IPR006115 |
| Pfam | PF00393 | 6-phosphogluconate dehydrogenase, C-terminal domain | 812 | 932 | 1.4E-35 | IPR006114 |
| Pfam | PF00393 | 6-phosphogluconate dehydrogenase, C-terminal domain | 767 | 805 | 4.0E-11 | IPR006114 |
| Pfam | PF01697 | Glycosyltransferase family 92 | 282 | 495 | 2.7E-28 | IPR008166 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 284 | 422 | 4.69E-6 | IPR029044 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 676 | 743 | 4.07E-5 | IPR036291 |
| SUPERFAMILY | SSF48179 | 6-phosphogluconate dehydrogenase C-terminal domain-like | 765 | 932 | 5.61E-47 | IPR008927 |
| Gene3D | G3DSA:1.10.1040.10 | - | 808 | 932 | 3.9E-38 | IPR013328 |
| Gene3D | G3DSA:3.40.50.720 | - | 659 | 767 | 2.4E-7 | - |
| Gene3D | G3DSA:1.10.1040.10 | - | 769 | 807 | 7.7E-11 | IPR013328 |
| SMART | SM01350 | 6PGD_2 | 767 | 932 | 6.6E-24 | IPR006114 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 31 | 8.0 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02360.1 | 6-phosphogluconate dehydrogenase family protein. | 0 |
| RefSeq | XP_051224944.1 | glycosyltransferase family 92 protein Os08g0121900-like [Lolium perenne] | 0 |
| Q9LI00 | 6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Oryza sativa subsp. japonica OX=39947 GN=G6PGH1 PE=2 SV=1 | 0 | |
| TrEMBL | F2DUS9 | Glycosyltransferase family 92 protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology