Basic Information
Locus ID:
Pt_Chr0205664
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Wall-associated receptor kinase C-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 192183105 | 192220776 | + | Pt_Chr0205664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 355,479.19 Da | 48.25 | 81.04 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2985 | 3253 | 5.2E-45 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 391 | 473 | 2.6E-9 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 822 | 887 | 1.0E-13 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 2399 | 2465 | 2.4E-8 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 1050 | 1112 | 6.5E-12 | IPR025287 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 2849 | 2897 | 8.5E-9 | IPR032872 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 1204 | 1266 | 2.9E-9 | IPR032872 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 976 | 1044 | 9.8E-10 | IPR032872 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 706 | 773 | 3.5E-8 | IPR032872 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 226 | 290 | 5.7E-5 | IPR032872 |
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 1448 | 1517 | 2.5E-11 | IPR032872 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 2140 | 2205 | 4.8E-12 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 1526 | 1592 | 2.1E-8 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 1759 | 1828 | 6.6E-12 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 83 | 150 | 4.0E-14 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 1297 | 1364 | 2.1E-11 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 2688 | 2756 | 1.9E-13 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2963 | 3260 | 7.42E-73 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 567 | 2.83E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 591 | 1.2E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2956 | 3059 | 1.6E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 466 | 8.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3060 | 3262 | 8.1E-52 | - |
| SMART | SM00220 | serkin_6 | 2983 | 3258 | 2.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2983 | 3258 | 37.799274 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 801 | 13.107179 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 3103 | 3115 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 2989 | 3011 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 396 | 418 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2341 | 2372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2630 | 2653 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18390.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_047057823.1 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [Lolium rigidum] | 0 |
| P0C5E2 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0E0MR34 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology