Basic Information
Locus ID:
Pt_Chr0205642
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 191616662 | 191618804 | + | Pt_Chr0205642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 72,333.75 Da | 45.78 | 89.77 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 363 | 648 | 2.12713E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 361 | 643 | 2.2E-29 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 70 | 5.3E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 646 | 2.32E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 214 | 6.8E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 671 | 1.8E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 119 | 4.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 441 | 3.8E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 125 | 234 | 5.6E-28 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 649 | 31.000822 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 690 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68400.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_051222796.1 | probable leucine-rich repeat receptor-like protein kinase At1g68400 [Lolium perenne] | 0 |
| Q9M9C5 | Probable leucine-rich repeat receptor-like protein kinase At1g68400 OS=Arabidopsis thaliana OX=3702 GN=At1g68400 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6WYG7 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg34958, jg5248 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4043 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025656 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g142530 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12847, Sbi_jg53034 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8828 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00026419, GOSA_00026420 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl32824, Sgl38106 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000000289, gene:ENSEOMG00000024624 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0013930, CQ.Regalona.r1.6BG0014720 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30214240 |
| Apiaceae | Apium graveolens | 1 | Ag1G01581 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G006210, COCNU_03G008790 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103718828, gene-LOC103723274 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G01231, Ftri5G01166 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G68400.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018235m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g23460.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g064990.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G2012 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G2204 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g01310 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g27760 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1519 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019193 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb4G22785, Lb4G22790, Lb4G22791 |
| Poaceae | Echinochloa crus-galli | 1 | CH02.875 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0008600, gene-QOZ80_1BG0057340 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0225880.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_037746, gene-QYE76_048930 |
| Poaceae | Oryza coarctata | 2 | Oco01G001360, Oco02G001370 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g04230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G075200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0205489, Pt_Chr0205555, Pt_Chr0205642 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G024070, Chr03G003730, Chr05G002030 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G083800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG004050, gene_TRIDC3BG006250 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G037200.1, TraesCS3B02G046700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb125150_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-57085, nbis-gene-7039 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g9918 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG13.703, evm.TU.LG21.390 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g02180 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_15_RagTag.53 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26358 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13011 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17399 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.35 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004668 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11688 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2875 |
| Salicaceae | Populus euphratica | 1 | populus_peu21061 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132641744 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018471 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3603 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1088 |
| Zosteraceae | Zostera marina | 2 | Zosma03g01130.v3.1, Zosma06g06600.v3.1 |