Basic Information
Locus ID:
Pt_Chr0205630
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 191346230 | 191356032 | - | Pt_Chr0205630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 136,521.02 Da | 48.99 | 89.50 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 948 | 1212 | 3.0004E-88 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 77 | 159 | 1.0E-5 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 223 | 289 | 1.2E-6 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 550 | 5.0E-12 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 945 | 1211 | 1.3E-46 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 613 | 709 | 9.1E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 747 | 828 | 1.3E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 581 | 8.7E-43 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 925 | 1212 | 1.48E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 405 | 564 | 4.5E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 726 | 832 | 3.1E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 606 | 710 | 1.2E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 404 | 2.4E-22 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 73 | 161 | 9.5E-7 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 188 | 291 | 3.9E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 900 | 1017 | 4.7E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1018 | 1224 | 2.3E-56 | - |
| SMART | SM00220 | serkin_6 | 942 | 1217 | 6.6E-35 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 603 | 704 | 13.574074 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 724 | 832 | 16.805674 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 60 | 164 | 8.975607 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 265 | 556 | 9.488874 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 942 | 1227 | 39.156139 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 180 | 291 | 15.131035 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1063 | 1075 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_037419099.1 | uncharacterized protein LOC119283800 [Triticum dicoccoides] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811MDM7 | Cysteine-rich receptor-like protein kinase 25 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology