Basic Information
Locus ID:
Pt_Chr0205570
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 189782688 | 189787640 | + | Pt_Chr0205570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 66,651.72 Da | 34.34 | 86.83 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 365 | 465 | 6.6E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 267 | 538 | 9.58E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 253 | 344 | 1.0E-14 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 2 | 119 | 7.5E-21 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 349 | 549 | 4.4E-47 | - |
| SMART | SM00220 | serkin_6 | 286 | 538 | 2.3E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 286 | 544 | 23.000977 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 383 | 395 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61360.2 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_024319061.1 | putative receptor-like protein kinase At4g00960 [Brachypodium distachyon] | 0 |
| O64784 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana OX=3702 GN=At1g61360 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6I2R8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH04.2149, AH04.2150, AH06.444, BH04.2209, CH09.212 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0390620, gene-QOZ80_8AG0629730 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0315350.1, HORVU.MOREX.r3.3HG0315360.1 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os12g14480.1, LOC_Os12g14610.1, LOC_Os12g14699.1 |
| Poaceae | Paspalum vaginatum | 16 | gene-BS78_05G233500, gene-BS78_05G233900, gene-BS78_K259300 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205570, Pt_Chr0205659 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G005670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G066400 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG074570 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G036700.1, TraesCS1D02G030000.2 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25837, Zma_g25838 |