Basic Information
Locus ID:
Pt_Chr0205410
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 185366843 | 185370986 | - | Pt_Chr0205410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 17,829.74 Da | 31.13 | 79.15 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 33 | 80 | 2.8E-7 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 3 | 113 | 1.66E-26 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 70 | 129 | 2.2E-11 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 1 | 69 | 8.0E-20 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_037411694.1 | pyruvate decarboxylase 1-like [Triticum dicoccoides] | 0 |
| Q05327 | Pyruvate decarboxylase 3 (Fragment) OS=Zea mays OX=4577 GN=PDC3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7TSR8 | pyruvate decarboxylase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology