Basic Information
Locus ID:
Pt_Chr0205341
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 183612858 | 183613811 | - | Pt_Chr0205341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 36,494.01 Da | 50.91 | 92.49 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 55 | 2.8E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 164 | 309 | 1.1E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 70 | 3.01E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 58 | 1.3E-6 | - |
| SMART | SM00256 | fbox_2 | 21 | 60 | 0.0021 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 68 | 10.292301 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56440.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_044435637.1 | MEIOTIC F-BOX protein MOF-like [Triticum aestivum] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0PZ88 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG127900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology