Basic Information
Locus ID:
Pt_Chr0205316
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 182933363 | 182934097 | - | Pt_Chr0205316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 22,446.25 Da | 38.06 | 87.02 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 2 | 104 | 5.32642E-8 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 138 | 196 | 5.1E-8 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 2 | 113 | 1.14E-13 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 135 | 196 | 2.51E-9 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 110 | 198 | 8.1E-13 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 1 | 109 | 3.7E-10 | IPR008974 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 198 | 10.137225 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.4 | - | 0 |
| RefSeq | XP_048566792.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum urartu] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6GNK9 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Pt_Chr0205316.