Basic Information
Locus ID:
Pt_Chr0205314
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 182922406 | 182926391 | - | Pt_Chr0205314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 40,676.08 Da | 30.04 | 82.29 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 172 | 354 | 2.16401E-94 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 7 | 124 | 7.9E-21 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 217 | 342 | 1.1E-16 | IPR011766 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 4 | 149 | 1.33E-31 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 172 | 366 | 1.47E-45 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 1 | 159 | 2.1E-40 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 166 | 353 | 4.8E-59 | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_044355591.1 | pyruvate decarboxylase 1-like [Triticum aestivum] | 0 |
| P51851 | Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum OX=3888 GN=PDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453E532 | pyruvate decarboxylase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology