Basic Information
Locus ID:
Pt_Chr0205246
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 180318464 | 180322075 | + | Pt_Chr0205246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 62,943.94 Da | 47.13 | 73.98 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 271 | 521 | 5.4197E-104 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 267 | 521 | 5.7E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 243 | 521 | 1.12E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 251 | 347 | 7.3E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 348 | 538 | 1.0E-60 | - |
| SMART | SM00220 | serkin_6 | 264 | 528 | 2.1E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 264 | 528 | 41.573055 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 388 | 400 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 428 | 438 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 492 | 514 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 382 | 400 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 447 | 469 | 1.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 344 | 357 | 1.9E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 116 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051223688.1 | probable serine/threonine-protein kinase SIS8 [Lolium perenne] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | I1HD21 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=104582513 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology