Basic Information
Locus ID:
Pt_Chr0205040
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 174728145 | 174733813 | + | Pt_Chr0205040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.17 | 66,818.84 Da | 53.16 | 80.98 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 149 | 411 | 1.25129E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 150 | 412 | 4.6E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 443 | 593 | 1.99E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 149 | 440 | 1.75E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 431 | 521 | 4.4E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 143 | 239 | 2.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 240 | 424 | 1.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 437 | 591 | 4.4E-17 | - |
| SMART | SM00220 | serkin_6 | 150 | 412 | 7.8E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 150 | 412 | 50.844959 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 156 | 182 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 274 | 286 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 85 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_051214912.1 | CDPK-related kinase 5-like [Lolium perenne] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | I1GS85 | Protein kinase domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100845265 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology