Basic Information
Locus ID:
Pt_Chr0204969
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 172498056 | 172501684 | - | Pt_Chr0204969 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 50,360.41 Da | 53.69 | 90.73 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 55 | 92 | 3.3E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 53 | 141 | 1.02E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 38 | 137 | 1.1E-7 | - |
| SMART | SM00256 | fbox_2 | 55 | 95 | 5.1E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 163 | 377 | 1.9E-19 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 49 | 95 | 9.629941 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10340.1 | F-box family protein. | 0 |
| RefSeq | XP_048569477.1 | putative F-box protein At4g09190 isoform X1 [Triticum urartu] | 0 |
| Q9LX89 | F-box protein At5g10340 OS=Arabidopsis thaliana OX=3702 GN=At5g10340 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ILX6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology