Basic Information
Locus ID:
Pt_Chr0204928
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 171423787 | 171426490 | + | Pt_Chr0204928 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 96,541.25 Da | 45.42 | 91.56 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 149 | 269 | 2.0782E-18 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 577 | 841 | 5.41479E-87 | - |
| CDD | cd01098 | PAN_AP_plant | 429 | 510 | 1.04431E-20 | - |
| Pfam | PF00069 | Protein kinase domain | 574 | 771 | 7.0E-46 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 437 | 494 | 1.6E-12 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 331 | 410 | 8.1E-8 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 196 | 292 | 8.3E-20 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 199 | 298 | 2.22E-17 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 552 | 840 | 1.27E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 646 | 847 | 8.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 543 | 645 | 1.7E-30 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 137 | 266 | 1.7E-13 | IPR036426 |
| SMART | SM00108 | blect_4 | 148 | 269 | 6.5E-18 | IPR001480 |
| SMART | SM00473 | ntp_6 | 436 | 510 | 7.4E-4 | IPR003609 |
| SMART | SM00220 | serkin_6 | 571 | 839 | 2.1E-39 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 113 | 867 | 2.1E-220 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 432 | 511 | 8.913311 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 571 | 843 | 36.838165 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 142 | 265 | 12.86266 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 690 | 702 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 577 | 599 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_048562564.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum urartu] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PRB7 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology