Basic Information
Locus ID:
Pt_Chr0204573
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 159745040 | 159752919 | - | Pt_Chr0204573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 72,182.34 Da | 43.55 | 64.06 | -1.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 559 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 597 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 451 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47690.1 | binding. | 0 |
| RefSeq | XP_044413147.1 | neurofilament heavy polypeptide-like [Triticum aestivum] | 0 |
| B6EUB3 | Sister chromatid cohesion protein PDS5 homolog A OS=Arabidopsis thaliana OX=3702 GN=PDS5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A453P2V3 | Tudor domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology