Basic Information
Locus ID:
Pt_Chr0204439
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 154770704 | 154777187 | - | Pt_Chr0204439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 63,751.46 Da | 45.81 | 77.57 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 57 | 199 | 1.9E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 41 | 218 | 3.66E-35 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 65 | 223 | 4.6E-26 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 56 | 218 | 29.841074 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_044403269.1 | uncharacterized protein LOC123127585 isoform X1 [Triticum aestivum] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PKB8 | NAC domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology