Basic Information
Locus ID:
Pt_Chr0203991
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 137786420 | 137794335 | - | Pt_Chr0203991 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 75,988.56 Da | 48.52 | 60.29 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 453 | 500 | 2.56E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 453 | 501 | 3.8E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 616 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 649 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 577 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 447 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47690.1 | binding. | 0 |
| RefSeq | XP_051193794.1 | sister chromatid cohesion protein PDS5 homolog C-like [Lolium perenne] | 0 |
| B6EUB3 | Sister chromatid cohesion protein PDS5 homolog A OS=Arabidopsis thaliana OX=3702 GN=PDS5A PE=1 SV=1 | 0 | |
| TrEMBL | A0A453P2V3 | Tudor domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology