Basic Information
Locus ID:
Pt_Chr0203848
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 132840679 | 132850749 | - | Pt_Chr0203848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.65 | 42,310.75 Da | 41.80 | 86.85 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 112 | 378 | 8.86E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 380 | 3.0E-6 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16810.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044953357.1 | uncharacterized protein LOC123403490 [Hordeum vulgare subsp. vulgare] | 0 |
| TrEMBL | A0A8I6YL37 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2056 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16392 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018356 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g049690 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14821, Sbi_jg55603 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26159 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017982 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl01072, Sgl06158 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000001949, gene:ENSEOMG00000030370 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0007480, CQ.Regalona.r1.3AG0007490 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30095000 |
| Apiaceae | Apium graveolens | 1 | Ag3G02355 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G003670 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103714586 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1190.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G13929 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G16810.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013656m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g27320.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB05g022370.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1779 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1951 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno18g05630 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g06990 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.1800 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011252 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb6G30752, Lb6G30754 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3082, BH07.2903, CH07.2984 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0141740, gene-QOZ80_2BG0197320 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0605820.1 |
| Poaceae | Oryza coarctata | 2 | Oco03G018750, Oco04G019480 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g46750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G231200 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0203827, Pt_Chr0203848 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G004610, Chr15G006060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G490200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG040730, gene_TRIDC6BG047690 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G265400.3, TraesCS6B02G292400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb187800_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-22184 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g16930 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG09.1252, evm.TU.LG09.1253 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g00720 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.580 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-7600 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4903 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5591 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000012l.345 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8461 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-684 |
| Salicaceae | Populus euphratica | 2 | populus_peu19276, populus_peu37394 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132632253 |
| Solanaceae | Solanum chilense | 1 | SOLCI002067900 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012336 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_3917 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G2827 |
| Zosteraceae | Zostera marina | 1 | Zosma02g02760.v3.1 |