HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Pt_Chr0203811
Species & Taxonomic ID: Puccinellia tenuiflora & 240906
Genome Assembly: GCA_012064385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Chr02 131460802 131461569 - Pt_Chr0203811
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.96 28,738.92 Da 34.12 86.35 0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047080143.1 uncharacterized protein LOC124690859 [Lolium rigidum] 0
TrEMBL I1J182 F-box domain-containing protein OS=Brachypodium distachyon OX=15368 GN=100845148 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH07.1321, AH07.1441, BH07.1366, BH07.1368, BH07.1405 ...
BH07.1412, CH07.1116
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_2AG0109700, gene-QOZ80_2AG0110130 ...
gene-QOZ80_2BG0163560, gene-QOZ80_2BG0163600, gene-QOZ80_2BG0163610
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.3HG0314030.1, HORVU.MOREX.r3.6HG0542260.1 ...
HORVU.MOREX.r3.4HG0387160.1.CDS1, HORVU.MOREX.r3.6HG0542100.1.CDS1, HORVU.MOREX.r3.6HG0553610.1, HORVU.MOREX.r3.6HG0555260.1, HORVU.MOREX.r3.7HG0726220.1, HORVU.MOREX.r3.7HG0740520.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_013410, gene-QYE76_019256, gene-QYE76_020131 ...
gene-QYE76_024738, gene-QYE76_026078, gene-QYE76_026079, gene-QYE76_026081, gene-QYE76_026292, gene-QYE76_026293, gene-QYE76_026294, gene-QYE76_026295, gene-QYE76_034976, gene-QYE76_035321, gene-QYE76_035751, gene-QYE76_036498, gene-QYE76_036499, gene-QYE76_059643, gene-QYE76_063286, gene-QYE76_068969
Poaceae Oryza coarctata 4 Oco03G007890, Oco04G008240, Oco04G008250, Oco04G008270
Poaceae Oryza sativa 2 LOC_Os02g18614.1, LOC_Os02g18720.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G123700, gene-BS78_K094100, gene-BS78_K243000 ...
gene-BS78_K244100
Poaceae Puccinellia tenuiflora 24 Pt_Chr0200702, Pt_Chr0200703, Pt_Chr0200704, Pt_Chr0200706 ...
Pt_Chr0200831, Pt_Chr0203811, Pt_Chr0204699, Pt_Chr0204703, Pt_Chr0204715, Pt_Chr0204716, Pt_Chr0204724, Pt_Chr0204725, Pt_Chr0300307, Pt_Chr0306953, Pt_Chr0307077, Pt_Chr0401444, Pt_Chr0401446, Pt_Chr0404219, Pt_Chr0404221, Pt_Chr0503491, Pt_Chr0505179, Pt_Chr0505426, Pt_Chr0601041, Pt_Chr0704558
Poaceae Sporobolus alterniflorus 3 Chr06G031510, Chr09G000780, Chr15G022780
Poaceae Thinopyrum elongatum 22 Tel1E01G645700, Tel2E01G134600, Tel2E01G148100 ...
Tel3E01G188900, Tel3E01G681600, Tel3E01G723100, Tel3E01G752900, Tel4E01G635600, Tel5E01G568900, Tel6E01G039000, Tel6E01G043500, Tel6E01G044200, Tel6E01G045100, Tel6E01G048200, Tel6E01G071100, Tel6E01G122100, Tel6E01G158400, Tel6E01G167200, Tel6E01G215200, Tel6E01G226200, Tel7E01G465900, Tel7E01G848600
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG057960, gene_TRIDC1BG017590 ...
gene_TRIDC1BG066740, gene_TRIDC3AG064480, gene_TRIDC3BG072760, gene_TRIDC6AG012980, gene_TRIDC6BG003780, gene_TRIDC6BG018120, gene_TRIDC6BG018180
Poaceae Triticum aestivum 62 TraesCS1A02G393700.1, TraesCS1B02G083300.1 ...
TraesCS1B02G423000.1, TraesCS1D02G065900.1, TraesCS1D02G402800.1, TraesCS2A02G058400.1, TraesCS2D02G057400.2, TraesCS3A02G109100.1, TraesCS3A02G428600.1.cds1, TraesCS3A02G456400.1, TraesCS3A02G456500.1, TraesCS3B02G128100.1, TraesCS3B02G466200.1.cds1, TraesCS3B02G496600.2, TraesCS3B02G496700.1, TraesCS3B02G496900.1.cds1, TraesCS3B02G497000.1, TraesCS3B02G497100.1, TraesCS3D02G110900.2, TraesCS3D02G449500.1, TraesCS3D02G449600.1, TraesCS3D02G449700.1.cds1, TraesCS3D02G449800.1, TraesCS4B02G391600.1, TraesCS4B02G392900.1, TraesCS5B02G357900.1, TraesCS5D02G363100.1, TraesCS5D02G363300.1, TraesCS5D02G497500.1, TraesCS6A02G010800.1, TraesCS6A02G023800.1.cds1, TraesCS6A02G023900.1, TraesCS6A02G047800.1, TraesCS6A02G100400.1, TraesCS6B02G017300.1, TraesCS6B02G019500.1.cds1, TraesCS6B02G032500.1, TraesCS6B02G032600.1, TraesCS6B02G032800.1, TraesCS6B02G095400.1, TraesCS6B02G095500.1, TraesCS6B02G120000.1, TraesCS6B02G120300.1, TraesCS6B02G128400.1, TraesCS6B02G128500.1, TraesCS6D02G023200.1, TraesCS6D02G027100.1, TraesCS6D02G027200.1, TraesCS6D02G027300.1, TraesCS6D02G027500.1, TraesCS6D02G044000.1, TraesCS6D02G055300.1, TraesCS6D02G069200.1, TraesCS6D02G080600.1, TraesCS6D02G080900.1, TraesCS7A02G496900.1, TraesCS7B02G400700.1.cds1, TraesCS7B02G481600.2, TraesCS7D02G483700.1, TraesCS7D02G484000.1, TraesCS7D02G484100.1.cds1, TraesCSU02G034900.1
Poaceae Zea mays 1 Zm00001eb236980_P001
Poaceae Zoysia japonica 3 nbis-gene-34074, nbis-gene-34088, nbis-gene-45205
Poaceae Zoysia macrostachya 3 Zma_g12614, Zma_g15308, Zma_g15320
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.