Basic Information
Locus ID:
Pt_Chr0203669
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 126482657 | 126486824 | + | Pt_Chr0203669 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 47,450.85 Da | 36.18 | 104.82 | 0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 429 | 3.0316E-46 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 389 | 8.8E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 9 | 431 | 7.46E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 6 | 431 | 3.4E-38 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 435 | 11.696512 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 56 | 72 | 1.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 313 | 334 | 1.4E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 373 | 396 | 1.4E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_047077171.1 | hippocampus abundant transcript 1 protein-like [Lolium rigidum] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6PNA5 | MFS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology