Basic Information
Locus ID:
Pt_Chr0202696
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 96172136 | 96179767 | - | Pt_Chr0202696 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 94,268.86 Da | 47.90 | 80.21 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 48 | 201 | 3.35524E-57 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 540 | 794 | 1.3E-39 | IPR001245 |
| Pfam | PF00582 | Universal stress protein family | 50 | 189 | 6.4E-14 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 50 | 195 | 6.53E-15 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 513 | 794 | 1.62E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 608 | 804 | 1.7E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 48 | 200 | 3.0E-16 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 515 | 607 | 4.4E-25 | - |
| SMART | SM00220 | serkin_6 | 535 | 799 | 6.6E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 798 | 34.46365 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 653 | 665 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 434 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_047078714.1 | U-box domain-containing protein 52-like [Lolium rigidum] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2Z4GT99 | Universal stress protein OS=Dasypyrum villosum OX=40247 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_13G001910 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.388, BH07.499, CH03.4432 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0101760, gene-QOZ80_2BG0155160 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0560490.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_020520 |
| Poaceae | Oryza coarctata | 1 | Oco04G002580 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g05820.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G039900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202696 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G272700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG016320, gene_TRIDC6BG021960 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G122700.2, TraesCS6B02G150900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb207960_P003 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12201 |