Basic Information
Locus ID:
Pt_Chr0202628
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 93546357 | 93581921 | - | Pt_Chr0202628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 441,264.56 Da | 36.47 | 102.04 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 3755 | 4019 | 3.816E-86 | - |
| CDD | cd14066 | STKc_IRAK | 2698 | 2962 | 9.66891E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 712 | 750 | 2.5E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2015 | 2081 | 4.6E-6 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 3750 | 4016 | 5.6E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 3255 | 3313 | 2.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 2469 | 2527 | 1.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2125 | 2162 | 1.9E-9 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 4 | 42 | 3.5E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 524 | 581 | 1.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 2320 | 2380 | 2.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 1332 | 1371 | 4.5E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 3428 | 3486 | 4.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 2692 | 2959 | 3.9E-39 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 1816 | 1874 | 8.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 2172 | 2539 | 5.49E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1984 | 2094 | 1.52E-15 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2964 | 3054 | 4.67E-5 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 386 | 631 | 2.55E-41 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1066 | 1264 | 1.26E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3737 | 4019 | 2.43E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 1349 | 1680 | 1.43E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 3065 | 3243 | 1.6E-19 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1625 | 1927 | 1.22E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2678 | 2962 | 3.24E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 3185 | 3637 | 1.05E-69 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 762 | 1132 | 3.92E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 73 | 486 | 4.32E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 5 | 117 | 3.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2236 | 2317 | 5.5E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 709 | 848 | 1.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2125 | 2235 | 1.5E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1494 | 1557 | 1.5E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1661 | 1937 | 1.8E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2653 | 2767 | 2.7E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3323 | 3655 | 2.4E-93 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3709 | 3824 | 5.8E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1982 | 2082 | 8.0E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3052 | 3322 | 5.8E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 944 | 1019 | 1.5E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1020 | 1287 | 2.5E-72 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 310 | 1.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1331 | 1493 | 3.5E-44 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 122 | 237 | 8.7E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2318 | 2600 | 6.5E-55 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 311 | 646 | 4.0E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1558 | 1660 | 7.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 849 | 943 | 3.2E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2768 | 2967 | 3.6E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2968 | 3045 | 8.7E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3825 | 4027 | 1.8E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 1861 | 1885 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 544 | 567 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1813 | 1836 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 3450 | 3474 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2188 | 2212 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1214 | 1238 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1519 | 1543 | 1.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 3326 | 3350 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 592 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 776 | 800 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2289 | 2312 | 79.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 2415 | 2436 | 460.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1519 | 1545 | 440.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 950 | 982 | 91.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 2491 | 2517 | 300.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1023 | 1047 | 250.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 3450 | 3482 | 340.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 3579 | 3605 | 500.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1861 | 1887 | 780.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1765 | 1788 | 560.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 3277 | 3303 | 350.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1446 | 1475 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1665 | 1691 | 470.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 3228 | 3255 | 450.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 3109 | 3131 | 640.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1214 | 1240 | 400.0 | - |
| SMART | SM00369 | LRR_typ_2 | 3579 | 3602 | 25.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 2318 | 2338 | 500.0 | - |
| SMART | SM00364 | LRR_bac_2 | 2415 | 2435 | 420.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1446 | 1469 | 38.0 | IPR003591 |
| SMART | SM00364 | LRR_bac_2 | 1109 | 1129 | 54.0 | - |
| SMART | SM00364 | LRR_bac_2 | 1519 | 1539 | 560.0 | - |
| SMART | SM00364 | LRR_bac_2 | 463 | 483 | 240.0 | - |
| SMART | SM00364 | LRR_bac_2 | 67 | 88 | 450.0 | - |
| SMART | SM00220 | serkin_6 | 2692 | 2965 | 1.5E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 3749 | 4022 | 4.6E-30 | IPR000719 |
| SMART | SM00364 | LRR_bac_2 | 3204 | 3224 | 410.0 | - |
| SMART | SM00364 | LRR_bac_2 | 544 | 564 | 360.0 | - |
| SMART | SM00364 | LRR_bac_2 | 3109 | 3132 | 78.0 | - |
| SMART | SM00364 | LRR_bac_2 | 2188 | 2208 | 390.0 | - |
| SMART | SM00364 | LRR_bac_2 | 91 | 111 | 16.0 | - |
| SMART | SM00364 | LRR_bac_2 | 800 | 823 | 340.0 | - |
| SMART | SM00369 | LRR_typ_2 | 67 | 92 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 3253 | 3277 | 4.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1665 | 1689 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1837 | 1860 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1765 | 1789 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 950 | 974 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2318 | 2342 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2415 | 2437 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1085 | 1109 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2367 | 2391 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2491 | 2515 | 18.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2692 | 2965 | 36.202133 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3749 | 4022 | 36.103195 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 2698 | 2721 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 3755 | 3778 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 3872 | 3884 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 2815 | 2827 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 1765 | 1778 | 4.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 1217 | 1230 | 4.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_051195026.1 | tyrosine-sulfated glycopeptide receptor 1-like [Lolium perenne] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D9YMF0 | Protein kinase domain-containing protein OS=Oryza glumipatula OX=40148 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology