Basic Information
Locus ID:
Pt_Chr0202369
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 86104210 | 86110715 | + | Pt_Chr0202369 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 89,159.62 Da | 51.31 | 91.35 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 569 | 815 | 2.5E-32 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 74 | 1.7E-4 | IPR013210 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 472 | 482 | 3.14E-5 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 243 | 5.67E-34 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 516 | 815 | 1.15E-53 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 258 | 3.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 617 | 1.2E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 619 | 827 | 2.4E-49 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 123 | 146 | 7.018892 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 819 | 27.693466 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 0 |
| RefSeq | XP_051194752.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 [Lolium perenne] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NNZ8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology