Basic Information
Locus ID:
Pt_Chr0202253
Species & Taxonomic ID:
Puccinellia tenuiflora & 240906
Genome Assembly:
GCA_012064385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr02 | 81482701 | 81488894 | + | Pt_Chr0202253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 134,074.59 Da | 53.88 | 82.94 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1064 | 1170 | 5.7E-14 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 794 | 890 | 2.2E-8 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 892 | 1014 | 7.3E-15 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 330 | 562 | 1.4E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 627 | 1.78E-66 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1042 | 1175 | 1.15E-21 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 778 | 1029 | 1.03E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 641 | 5.2E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 866 | 1026 | 5.3E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1032 | 1136 | 5.1E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 771 | 865 | 6.0E-23 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 159 | 261 | 7.5E-22 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 289 | 400 | 2.7E-30 | - |
| SMART | SM00220 | serkin_6 | 327 | 634 | 6.7E-21 | IPR000719 |
| SMART | SM00220 | serkin_6 | 791 | 1014 | 7.8E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1062 | 1192 | 13.36159 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 327 | 634 | 32.795841 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 791 | 1023 | 14.110692 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 797 | 819 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 333 | 355 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 761 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 114 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_044963901.1 | receptor like protein kinase S.2-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6WFU2 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology